PyMol software introduction
The authors of the software claim that PyMOL was used to produce a quarter of all protein structure images published in the scientific literature. PyMOL is one of the few open source visualization tools that can be used in the field of structural biology. The software is named after Py+MOL: "Py" means that it is derived from a computer language Python, and "MOL" means that it is a software used to display the structure of molecules (molecule in English).
PyMol software features
The interface of PyMOL is mainly composed of two parts, the control window (Control window) and the display window (Viewing window). window). The control window mainly includes the menu bar (Pull-down menus), the operation record window (Feedback window), and the common control button window (Control Buttons), command window (Command line); the display window mainly includes the visualization window (Display area), object list (Object menu), mouse hints, movie controls, and command line.
PyMol software operation
You can see in the object list window that each object has an A S H L C has five buttons, which represent Action, Show, Hide, Label, and Color respectively. They can complete some operations on the corresponding objects.
"A" button can perform various processing on the corresponding object, such as centering, renaming, marking, deleting, etc.; you can also use the preset scheme to display the 3D structure.
“S” button can set the display style of the corresponding object
The “H” button can hide a certain style of the corresponding object, and can also flexibly hide certain specific structures.
The “L” button can add labels to the corresponding objects. In addition, you can click “Setting -> Label" to change the font, size, color, etc. of the label. After adding a label, the label may be obscured by the structure. In this case, the label needs to be moved. In the mouse mode window, click "Mouse "3-Button Viewing" behind "Mode" changes to "3-Button Editing", then hold down the "Ctrl" key on the keyboard, move the mouse over the residue label, press and hold the left mouse button, and then drag the mouse to adjust the position of the label.
The “C” button can change the color of the corresponding object, and you can choose to use the system’s preset color scheme, such as clicking “C -> by ss -> Helix Sheet Loop" causes the 3D structure to be colored according to the secondary structure.
PyMol update log
1. Sweep the bug out and carry it out to the end
2. The most stable version ever
Huajun editor recommends:
After so many years of updates and optimizations, PyMol has become more user-friendly and more technological. It is highly recommended to everyone and you are welcome to download it. Those who are interested can also downloadUbuntu Server 64bit,Sogou input method,Sogou input method,WPS Office For Linux rpm,WPS Office For Linux rpm(64bit).
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